Publications

Journal Publications

Hambalek JA, Kong JE, Brown C, Muñoz HE, Horn T, Bogumil M, Quick E, Ozcan A, Di Carlo D. Methylation-sensitive loop-mediated isothermal amplification (LAMP): nucleic acid methylation detection through LAMP with mobile fluorescence readout. ACS Sensors (2021).

Muñoz HE*, Urbanska M*, Bagnall JS, Otto O, Manalis SR, Di Carlo D, Guck J. A comparison of microfluidic methods for high-throughput cell deformability measurements. Nature Methods (2020).

Muñoz HE, Riche CT, Kong JE, van Zee M, Garner OB, Ozcan A, & Di Carlo D. Fractal LAMP: Label-Free Analysis of Fractal Precipitate for Digital Loop-Mediated Isothermal Nucleic Acid Amplification. ACS Sensors (2020).

Orfanos S, Jude J, Deeney BT, Cao G, Rastogi D, van Zee M, Pushkarsky I, Muñoz HE, Damoiseaux R, Di Carlo D, & Panettieri RA. Obesity increases airway smooth muscle responses to contractile agonists. American Journal of Physiology-Lung Cellular and Molecular Physiology (2018).

Muñoz HE*, Li M*, Riche CT, Nitta N, Diebold E, Lin J, Owsley K, Bahr M, Goda K, & Di Carlo D. Single-Cell Analysis of Morphological and Metabolic Heterogeneity in Euglena gracilis by Fluorescence-Imaging Flow Cytometry. Analytical Chemistry (2018).

Li M, Muñoz HE, Goda K, & Di Carlo D. Shape-based separation of microalga Euglena gracilis using inertial microfluidics. Scientific Reports (2017).

Li M, Muñoz HE, Schmidt A, Guo B, Lei C, Goda K, & Di Carlo D. Inertial focusing of ellipsoid Euglena gracilis cells in a stepped microchannel. Lab on a Chip (2016).

Burns JE, Yao J, Muñoz HE, Summers RM. Automated Detection, Localization, and Classification of Traumatic Vertebral Body Fractures in the Thoracic and Lumbar Spine at CT. Radiology 278.1 (2016): 64-73.

Muñoz HE, Che J, Kong JE, Di Carlo D. Advances in the production and handling of encoded microparticles. Lab on a Chip (2014).

Yao J, Burns JE, Muñoz HE, Summers RM. Cortical Shell Unwrapping for Vertebral Body Abnormality Detection on Computed Tomography. Computerized Medical Imaging and Graphics (2014).

Burns JE, Wiese T, Yao J, Muñoz HE, Jones EC, Summers RM. Automated Detection of Sclerotic Metastases in the Thoracolumbar Spine at CT. Radiology 268.1 (2013): 69–78.

Conference Publications

Muñoz HE, Riche CT, Kong JE, Garner OB, Ozcan A, Di Carlo D. Bright Field Analysis of Digital LAMP Assay. UC Bioengineering Symposium 2017. Rapid Fire Talk and Poster.

Li. M, Muñoz HE, Lin J, Owsley K, Goda K, Diebold E, Di Carlo D. Analysis Of Microalgae Lipid Production Using High-Throughput Fluorescence Imaging Flow Cytometry. MicroTAS 2016. Poster and Paper.

Li. M, Muñoz HE, Lin J, Owsley K, Diebold E, Goda K, Di Carlo D. Inertial Focusing and Imaging Flow Cytometry of Euglena gracilis for Biodiesel Applications. Cyto 2016. Oral Presentation.

Muñoz HE, Yao J, Burns JE, Pham Y, Stieger J, Summers RM. Vertebral Degenerative Disc Disease Severity Evaluation Using Random Forest Classification. SPIE 2014. Poster and Paper.

Yao JE, Muñoz HE, Burns JE, Kurdziel K, Choyke PL, Lu L, Summers RM. Detecting Vertebral Degenerative Disease on 18F-NaF PET/CT Using a Novel Cortical Shell Map. RSNA 2013. Oral Presentation.

Yao JE, Muñoz HE, Burns JE, Lu L, Kurdziel K, Summers RM. Computer Aided Detection of Spinal Degenerative Osteophytes on Sodium Fluoride PET/CT. Computational Methods and Clinical Applications for Spine Imaging Workshop, MICCAI 2013.

Muñoz HE, Yao J, Burns JE, Choyke PL, Kurdziel K, Summers RM. Automated detection of vertebral osteophytosis on [18F]-NaF PET/CT. CARS 2013. Poster.

Muñoz HE, Yao J, Burns JE, Summers RM. Detection of Vertebral Degenerative Disc Disease Based on Cortical Shell Unwrapping. SPIE 2013. Oral Presentation and Paper.

Yao J, Burns JE, Muñoz HE, Summers RM. Computer Aided Detection of Vertebral Body Fractures on Trauma CT. RSNA 2012. Oral Presentation.

Yao J, Burns JE, Muñoz HE, Summers RM: Detection of Vertebral Body Fractures Based on Cortical Shell Unwrapping. MICCAI (3) 2012: 509-516. Poster and Paper.